Liam Keegan :: Projects

C++ Projects

Some open source C++ projects I have worked on:

Spatial Model Editor (2019-2025)
- GUI tool to create and simulate spatial models of bio-chemical reactions
- Source code c++20 Qt6 nanobind VTK oneTBB
Hammingdist (2020-2024)
- Fast SIMD/CUDA hamming distance implementation with a Python interface
- Source code c++17 CUDA SIMD pybind11
pybind11-numpy-example (2021)
- Simple example of pybind11/numpy including CI to build wheels and deploy to PyPI
- Source code c++11 pybind11 CMake Catch2
blockCG (2018)
- Reference C++ implementation of SBCGrQ and other block CG solvers from 1808.01829
- Source code c++11 Eigen CMake Catch2

Some open source Python projects I have worked on:

Visuomotor Serial Targeting Task (VSTT) (2022-2023)
- GUI tool to create, run and analyse motor skill acquisition experiments
- Source code Python PyQt psychopy
sme-contrib (2021)
- Parameter fitting and plotting functionality for Spatial Model Editor
- Source code Python
openQCD-input-file-editor (2015)
- GUI tool to edit and validate openQCD simulation code input files
- Source code Python PyQt

Some open source web projects I have worked on:

MONDEY (2024-2025)
- In progress
- Source code Typescript Python svelte FastAPI tailwind docker
predicTCR (2024-2025)
- Website and distributed runner architecture for DNA sequence machine learning model.
- Source code Typescript Python vue.js Flask docker
SampleFlow (2022-2023)
- Website and REST API to manage DNA sequencing samples and results
- Source code Typescript Python vue.js Flask docker
IWR Interactive Visualization (2022)
- Interactive visualization of IWR research activities
- Source code TypeScript svg.js npm
Spatial Model Editor Website (2019-2025)
- Simple static website with content generated from yaml
- Source code Pug JavaScript Bootstrap npm
This website (2017-2025)
- Simple static website with content generated from yaml and markdown
- Source code Jekyll yaml CSS